Ok thanks someone else made one for me in reddit so all good.

https://www.reddit.com/r/ftlgame/commen ... ?context=1

Im trying to get the hard flagship version into normal mode with this mod. I got the mod working and set Flagship A as the only flagship mode so it is the same each time. When i got to the flagship, it has the flagship hard version with the doors connected but the systems location has changed. This ...